I have two files which content are:
File 1:
ATOM 1 N LEU 1 -10.186 -21.276 -0.497 1.00 0.00 PROTATOM 2 HT1 LEU 1 -10.773 -22.005 -0.843 1.00 0.00 PROTATOM 3 HT2 LEU 1 -9.316 -21.441 -0.958 1.00 0.00 PROTATOM 4 HT3 LEU 1 -10.007 -21.389 0.478 1.00 0.00 PROTATOM 5 CA LEU 1 -10.642 -19.924 -0.729 1.00 0.00 PROTATOM 6 HA LEU 1 -10.092 -19.286 -0.214 1.00 1.00 PROTATOM 7 CB LEU 1 -10.604 -19.551 -2.214 1.00 1.00 PROTATOM 8 HB1 LEU 1 -11.432 -19.802 -2.731 1.00 1.00 PROTATOM 9 HB2 LEU 1 -9.764 -19.989 -2.566 1.00 1.00 PROTATOM 10 CG LEU 1 -10.447 -17.969 -2.340 1.00 1.00 PROT
File 2:
ATOM 1 N LEU 1 -10.186 -21.276 -0.497 1.00 2.00 PROTATOM 2 HT1 LEU 1 -10.773 -22.005 -0.843 1.00 4.00 PROTATOM 3 HT2 LEU 1 -9.316 -21.441 -0.958 5.00 4.00 PROTATOM 4 HT3 LEU 1 -10.007 -21.389 0.478 1.00 4.00 PROTATOM 5 CA LEU 1 -10.642 -19.924 -0.729 1.00 3.00 PROTATOM 6 HA LEU 1 -10.092 -19.286 -0.214 1.00 4.00 PROTATOM 7 CB LEU 1 -10.604 -19.551 -2.214 1.00 3.00 PROTATOM 8 HB1 LEU 1 -11.432 -19.802 -2.731 1.00 4.00 PROTATOM 9 HB2 LEU 1 -9.764 -19.989 -2.566 1.00 4.00 PROTATOM 10 CG LEUUUU 1 -10.447 -17.969 -2.340 1.00 3.00 PROT
The desired output file would be:
ATOM 1 N LEU 1 -10.186 -21.276 -0.497 1.00 0.00 PROTATOM 2 HT1 LEU 1 -10.773 -22.005 -0.843 1.00 0.00 PROTATOM 3 HT2 LEU 1 -9.316 -21.441 -0.958 5.00 0.00 PROTATOM 4 HT3 LEU 1 -10.007 -21.389 0.478 1.00 0.00 PROTATOM 5 CA LEU 1 -10.642 -19.924 -0.729 1.00 0.00 PROTATOM 6 HA LEU 1 -10.092 -19.286 -0.214 1.00 1.00 PROTATOM 7 CB LEU 1 -10.604 -19.551 -2.214 1.00 1.00 PROTATOM 8 HB1 LEU 1 -11.432 -19.802 -2.731 1.00 1.00 PROTATOM 9 HB2 LEU 1 -9.764 -19.989 -2.566 1.00 1.00 PROTATOM 10 CG LEUUUU 1 -10.447 -17.969 -2.340 1.00 1.00 PROT
I want to replace the content of the 10th column of file 2 with the content of 10th column in file 1
My first try was:
awk -v OFS="\t" 'FNR==NR{a[NR]=$10;next}{$10=a[FNR]}1' file1 file2
But the tabbed file that I get, the program that I am using to read it, it does not read it in tabbed form.
Then, I tried:
awk 'FNR==NR{a[NR]=$10;next}{$10=a[FNR]}1' file1 file2
And the program does not read it neither.
So... I need to keep the original spacing.
Any suggestion?